My OCD demanded I take a few minutes and alphabetize that list. Also added the few mentions in the comments that were not included:

Alces alces alces Alle alle alle Amandava amandava amandava Amazilia amazilia amazilia Anhinga anhinga anhinga Anser anser anser Antigone antigone antigone Apus apus apus Arcinella arcinella arcinella Astacus astacus astacus Avicularia avicularia avicularia

Basiliscus basiliscus basiliscus Belone belone belone Bison bison bison Bubo bubo bubo Bufo bufo bufo Buteo buteo buteo

Capreolus capreolus capreolus Caracal caracal caracal Carduelis carduelis carduelis Cardinalis cardinalis cardinalis Caretta caretta caretta Cerastes cerastes cerastes Chalcides chalcides chalcides Chinchilla chinchilla chinchilla Chitra chitra chitra Chloris chloris chloris Ciconia ciconia ciconia Cinclus cinclus cinclus Clelia clelia clelia Coccothraustes coccothraustes coccothraustes Cochlearius cochlearius cochlearius Coeligena coeligena coeligena Colius colius colius Coturnix coturnix coturnix Crossoptilon crossoptilon crossoptilon Curaeus curaeus curaeus Curruca curruca curruca

Dama dama dama Diuca diuca diuca

Echiurus echiurus echiurus Erythrogenys erythrogenys erythrogenys

Francolinus francolinus francolinus

Gallinago gallinago gallinago Gallus gallus gallus Gazella gazella gazella Genetta genetta genetta Giraffa giraffa giraffa Gorilla gorilla gorilla Grus grus grus Gulo gulo gulo

Himantopus himantopus himantopus Hoolock hoolock hoolock Hyaena hyaena hyaena

Icterus icterus icterus Indri indri indri

Jacana jacana jacana

Lagopus lagopus lagopus Lepadogaster lepadogaster lepadogaster Lerwa lerwa lerwa Limosa limosa limosa Lutra lutra lutra Lynx lynx lynx

Manacus manacus manacus Marmota marmota marmota Martes martes martes Melanodera melanodera melanodera Meles meles meles Mephitis mephitis mephitis Microchaetus microchaetus microchaetus Milvus milvus milvus Modiolus modiolus modiolus Molossus molossus molossus Myotis myotis myotis

Nasua nasua nasua Natrix natrix natrix Nyctelius nyctelius nyctelius Nycticorax nycticorax nycticorax

Oenanthe oenanthe oenanthe Oreotragus oreotragus oreotragus

Pauxi pauxi pauxi Perdix perdix perdix Petaurista petaurista petaurista Petronia petronia petronia Phocoena phocoena phocoena Phoenicurus phoenicurus phoenicurus Pica pica pica Pipistrellus pipistrellus pipistrellus Pipra pipra pipra Pithecia pithecia pithecia Porites porites porites Porphyrio porphyrio porphyrio Puffinus puffinus puffinus Pungitius pungitius pungitius Pyrope pyrope pyrope Pyrrhocorax pyrrhocorax pyrrhocorax Pyrrhula pyrrhula pyrrhula

Quadrula quadrula quadrula Quelea quelea quelea

Radjah radjah radjah Rattus rattus rattus Redunca redunca redunca Regulus regulus regulus Riparia riparia riparia Rupicapra rupicapra rupicapra

Saccolaimus saccolaimus saccolaimus Salamandra salamandra salamandra Schoeniclus schoeniclus schoeniclus Scincus scincus scincus Sprattus sprattus sprattus Suiriri suiriri suiriri Sula sula sula

Tchagra tchagra tchagra Tibicen tibicen tibicen Troglodytes troglodytes troglodytes

Vicugna vicugna vicugna Volva volva volva Vulpes vulpes vulpes

Zungaro zungaro zungaro

I had Fire Salamanders for a long time and their scientific name was Salamandra salamandra salamandra (or S. s. salamandra)